Difference between revisions of "SJ13957"

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(Created page with "Category:gene == Gene SJ05429 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * ACID-PHOSPHATASE-RXN *...")
(Created page with "Category:gene == Gene SJ13957 == * transcription-direction: ** positive * right-end-position: ** 380459 * left-end-position: ** 373689 * centisome-position: ** 51.466995...")
 
(4 intermediate revisions by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05429 ==
+
== Gene SJ13957 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 380459
 +
* left-end-position:
 +
** 373689
 +
* centisome-position:
 +
** 51.466995   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACID-PHOSPHATASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
** Category: [[orthology]]
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** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-5822]]
+
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11277]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16030]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16121]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17730]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6348]]
+
* [[TRIGLSYN-PWY]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
* [[PWY-7039]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5083]]
+
* [[PWY-6453]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[NAD-BIOSYNTHESIS-II]]
+
* [[PWY-7782]]
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=380459}}
 +
{{#set: left-end-position=373689}}
 +
{{#set: centisome-position=51.466995    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=6}}
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ13957

  • transcription-direction:
    • positive
  • right-end-position:
    • 380459
  • left-end-position:
    • 373689
  • centisome-position:
    • 51.466995

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13957&oldid=131899"