Difference between revisions of "SJ13961"
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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=VAL VAL] == * common-name: ** l-valine * smiles: ** cc(c)c([n+])c([o-])=o * inchi-key: ** kzsnj...") |
(Created page with "Category:gene == Gene SJ13961 == * transcription-direction: ** positive * right-end-position: ** 427246 * left-end-position: ** 419833 * centisome-position: ** 57.82226...") |
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| (8 intermediate revisions by 4 users not shown) | |||
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| − | [[Category: | + | [[Category:gene]] |
| − | == | + | == Gene SJ13961 == |
| − | * | + | * transcription-direction: |
| − | ** | + | ** positive |
| − | * | + | * right-end-position: |
| − | ** | + | ** 427246 |
| − | * | + | * left-end-position: |
| − | ** | + | ** 419833 |
| − | * | + | * centisome-position: |
| − | ** | + | ** 57.82226 |
| − | == Reaction(s) | + | == Organism(s) associated with this gene == |
| − | * [[ | + | * [[S.japonica_carotenoid_curated]] |
| − | * [[ | + | == Reaction(s) associated == |
| − | * [[ | + | * [[GBDP]] |
| − | * [[ | + | ** Category: [[orthology]] |
| − | * [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | * [[ | + | * [[GDPPYPHOSKIN-RXN]] |
| − | + | ** Category: [[annotation]] | |
| − | * [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | * [[ | + | * [[GTPPYPHOSKIN-RXN]] |
| − | == | + | ** Category: [[annotation]] |
| − | {{#set: | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: | + | ** Category: [[orthology]] |
| − | {{#set: | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| + | * [[PPGPPSYN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN0-6427]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PPGPPMET-PWY]] | ||
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=427246}} | ||
| + | {{#set: left-end-position=419833}} | ||
| + | {{#set: centisome-position=57.82226 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=5}} | ||
| + | {{#set: nb pathway associated=1}} | ||
Latest revision as of 11:02, 18 March 2021
Contents
Gene SJ13961
- transcription-direction:
- positive
- right-end-position:
- 427246
- left-end-position:
- 419833
- centisome-position:
- 57.82226
Organism(s) associated with this gene
Reaction(s) associated
- GBDP
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- GDPPYPHOSKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GTPPYPHOSKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
- PPGPPSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-6427
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PPGPPMET-PWY
- 5 reactions found over 6 reactions in the full pathway
