Difference between revisions of "SJ13961"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Farnesylated-CAAX-proteins Farnesylated-CAAX-proteins] == * common-name: ** a farnesylated prot...")
 
(Created page with "Category:gene == Gene SJ13961 == * transcription-direction: ** positive * right-end-position: ** 427246 * left-end-position: ** 419833 * centisome-position: ** 57.82226...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Farnesylated-CAAX-proteins Farnesylated-CAAX-proteins] ==
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== Gene SJ13961 ==
* common-name:
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* transcription-direction:
** a farnesylated protein that ends with a caax sequence
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** positive
== Reaction(s) known to consume the compound ==
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* right-end-position:
* [[RXN-11698]]
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** 427246
== Reaction(s) known to produce the compound ==
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* left-end-position:
* [[RXN-17573]]
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** 419833
== Reaction(s) of unknown directionality ==
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* centisome-position:
{{#set: common-name=a farnesylated protein that ends with a caax sequence}}
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** 57.82226   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[GBDP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[GDPPYPHOSKIN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GTPPYPHOSKIN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[PPGPPSYN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-6427]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PPGPPMET-PWY]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=427246}}
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{{#set: left-end-position=419833}}
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{{#set: centisome-position=57.82226    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=1}}

Latest revision as of 11:02, 18 March 2021

Gene SJ13961

  • transcription-direction:
    • positive
  • right-end-position:
    • 427246
  • left-end-position:
    • 419833
  • centisome-position:
    • 57.82226

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PPGPPMET-PWY
    • 5 reactions found over 6 reactions in the full pathway