Difference between revisions of "SJ13961"

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(Created page with "Category:gene == Gene SJ06279 == * transcription-direction: ** negative * right-end-position: ** 43169 * left-end-position: ** 37205 * centisome-position: ** 45.52407...")
(Created page with "Category:gene == Gene SJ12004 == * transcription-direction: ** positive * right-end-position: ** 307054 * left-end-position: ** 288572 * centisome-position: ** 79.65177...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06279 ==
+
== Gene SJ12004 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 43169
+
** 307054
 
* left-end-position:
 
* left-end-position:
−
** 37205
+
** 288572
 
* centisome-position:
 
* centisome-position:
−
** 45.52407    
+
** 79.65177    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
* [[2.4.1.119-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14240]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16761]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-7445]]
+
{{#set: transcription-direction=positive}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=307054}}
−
* [[PWY-5466]]
+
{{#set: left-end-position=288572}}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: centisome-position=79.65177   }}
−
* [[PWY-6824]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: nb reaction associated=2}}
−
* [[PWY-5469]]
+
{{#set: nb pathway associated=1}}
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=43169}}
 
−
{{#set: left-end-position=37205}}
 
−
{{#set: centisome-position=45.52407   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=5}}
 
−
{{#set: nb pathway associated=6}}
 

Revision as of 14:44, 5 January 2021

Gene SJ12004

  • transcription-direction:
    • positive
  • right-end-position:
    • 307054
  • left-end-position:
    • 288572
  • centisome-position:
    • 79.65177

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13961&oldid=54131"