Difference between revisions of "SJ13961"

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(Created page with "Category:gene == Gene SJ12004 == * transcription-direction: ** positive * right-end-position: ** 307054 * left-end-position: ** 288572 * centisome-position: ** 79.65177...")
(Created page with "Category:gene == Gene SJ06279 == * transcription-direction: ** negative * right-end-position: ** 43169 * left-end-position: ** 37205 * centisome-position: ** 45.52407...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12004 ==
+
== Gene SJ06279 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 307054
+
** 43169
 
* left-end-position:
 
* left-end-position:
−
** 288572
+
** 37205
 
* centisome-position:
 
* centisome-position:
−
** 79.65177    
+
** 45.52407    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.4.1.119-RXN]]
+
* [[PEROXID-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-16761]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
+
* [[PWY-7214]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7445]]
−
{{#set: right-end-position=307054}}
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=288572}}
+
* [[PWY-5466]]
−
{{#set: centisome-position=79.65177   }}
+
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6824]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5469]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5461]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=43169}}
 +
{{#set: left-end-position=37205}}
 +
{{#set: centisome-position=45.52407   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=6}}

Revision as of 12:58, 14 January 2021

Gene SJ06279

  • transcription-direction:
    • negative
  • right-end-position:
    • 43169
  • left-end-position:
    • 37205
  • centisome-position:
    • 45.52407

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




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