Difference between revisions of "SJ13972"
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(Created page with "Category:gene == Gene SJ09795 == * transcription-direction: ** positive * right-end-position: ** 5504 * left-end-position: ** 4252 * centisome-position: ** 11.575108 =...") |
(Created page with "Category:gene == Gene SJ11952 == * transcription-direction: ** positive * right-end-position: ** 29619 * left-end-position: ** 21165 * centisome-position: ** 5.8367047...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ11952 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 29619 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 21165 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 5.8367047 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[RXN3DJ-170]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[RXN66-221]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[TYROSINE-DECARBOXYLASE-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[PWY-3181]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-581]] | ||
+ | ** '''5''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-5473]] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5877]] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6326]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6307]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7936]] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5290]] | ||
+ | ** '''2''' reactions found over '''17''' reactions in the full pathway | ||
+ | * [[PWY-6030]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY66-301]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5426]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5403]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-3581]] | ||
+ | ** '''6''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-6133]] | ||
+ | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7297]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5254]] | ||
+ | ** '''1''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6802]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7826]] | ||
+ | ** '''2''' reactions found over '''25''' reactions in the full pathway | ||
+ | * [[PWY-5474]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | </div> | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=29619}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=21165}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=5.8367047 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
+ | {{#set: nb pathway associated=19}} |
Revision as of 14:44, 5 January 2021
Contents
Gene SJ11952
- transcription-direction:
- positive
- right-end-position:
- 29619
- left-end-position:
- 21165
- centisome-position:
- 5.8367047
Organism(s) associated with this gene
Reaction(s) associated
- AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN3DJ-170
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN66-221
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- TYROSINE-DECARBOXYLASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-3181
- 2 reactions found over 3 reactions in the full pathway
- PWY-581
- 5 reactions found over 12 reactions in the full pathway
- PWY-5473
- 1 reactions found over 6 reactions in the full pathway
- PWY-5877
- 1 reactions found over 6 reactions in the full pathway
- PWY-6326
- 2 reactions found over 5 reactions in the full pathway
- PWY-6307
- 4 reactions found over 4 reactions in the full pathway
- PWY-7936
- 1 reactions found over 6 reactions in the full pathway
- PWY-5290
- 2 reactions found over 17 reactions in the full pathway
- PWY-6030
- 1 reactions found over 4 reactions in the full pathway
- PWY66-301
- 2 reactions found over 4 reactions in the full pathway
- PWY-5426
- 1 reactions found over 3 reactions in the full pathway
- PWY-5403
- 1 reactions found over 2 reactions in the full pathway
- PWY-3581
- 6 reactions found over 11 reactions in the full pathway
- PWY-6133
- 2 reactions found over 7 reactions in the full pathway
- PWY-7297
- 1 reactions found over 2 reactions in the full pathway
- PWY-5254
- 1 reactions found over 8 reactions in the full pathway
- PWY-6802
- 3 reactions found over 4 reactions in the full pathway
- PWY-7826
- 2 reactions found over 25 reactions in the full pathway
- PWY-5474
- 1 reactions found over 5 reactions in the full pathway