Difference between revisions of "SJ13980"

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(Created page with "Category:gene == Gene SJ16901 == * transcription-direction: ** negative * right-end-position: ** 128364 * left-end-position: ** 110101 * centisome-position: ** 39.93638...")
(Created page with "Category:gene == Gene SJ13980 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RR-BUTANEDIOL-DEHYDROGEN...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ16901 ==
+
== Gene SJ13980 ==
* transcription-direction:
 
** negative
 
* right-end-position:
 
** 128364
 
* left-end-position:
 
** 110101
 
* centisome-position:
 
** 39.93638   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RR-BUTANEDIOL-DEHYDROGENASE-RXN]]
* [[4-COUMARATE--COA-LIGASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* [[6.2.1.34-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[ACETATE--COA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[BUTYRATE--COA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10919]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-1126]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-2001]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5951]]
* [[PWY-7397]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY3O-246]]
* [[PWY-6320]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6435]]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY1F-FLAVSYN]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-361]]
 
** '''7''' reactions found over '''15''' reactions in the full pathway
 
* [[PWY-5135]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7398]]
 
** '''3''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-7046]]
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7897]]
 
** '''3''' reactions found over '''15''' reactions in the full pathway
 
* [[PWY-5754]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6920]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6982]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6343]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-1121]]
 
** '''9''' reactions found over '''19''' reactions in the full pathway
 
* [[PWY66-161]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7118]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY66-162]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY0-1313]]
 
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
* [[PWY-6672]]
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY66-21]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7007]]
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6673]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6457]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=128364}}
 
{{#set: left-end-position=110101}}
 
{{#set: centisome-position=39.93638    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=23}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:03, 18 March 2021

Gene SJ13980

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5951
    • 1 reactions found over 1 reactions in the full pathway
  • PWY3O-246
    • 1 reactions found over 1 reactions in the full pathway