Difference between revisions of "SJ14038"

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(Created page with "Category:gene == Gene SJ12529 == * transcription-direction: ** positive * right-end-position: ** 93783 * left-end-position: ** 84310 * centisome-position: ** 23.567461...")
(Created page with "Category:gene == Gene SJ14038 == * transcription-direction: ** negative * right-end-position: ** 280295 * left-end-position: ** 275257 * centisome-position: ** 84.02331...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12529 ==
+
== Gene SJ14038 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 93783
+
** 280295
 
* left-end-position:
 
* left-end-position:
−
** 84310
+
** 275257
 
* centisome-position:
 
* centisome-position:
−
** 23.567461    
+
** 84.02331    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1TRANSKETO-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2TRANSKETO-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DXS-RXN]]
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6545]]
−
* [[P124-PWY]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
* [[PWY-7210]]
−
* [[CALVIN-PWY]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[P185-PWY]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[PWY-1861]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P21-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[NONOXIPENT-PWY]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5723]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6891]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6892]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PYRIDOXSYN-PWY]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[NONMEVIPP-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7560]]
 
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
</div>
+
{{#set: transcription-direction=negative}}
−
{{#set: transcription-direction=positive}}
+
{{#set: right-end-position=280295}}
−
{{#set: right-end-position=93783}}
+
{{#set: left-end-position=275257}}
−
{{#set: left-end-position=84310}}
+
{{#set: centisome-position=84.02331   }}
−
{{#set: centisome-position=23.567461   }}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb pathway associated=4}}
−
{{#set: nb pathway associated=13}}
 

Latest revision as of 11:01, 18 March 2021

Gene SJ14038

  • transcription-direction:
    • negative
  • right-end-position:
    • 280295
  • left-end-position:
    • 275257
  • centisome-position:
    • 84.02331

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14038&oldid=132123"