Difference between revisions of "SJ14141"

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(Created page with "Category:gene == Gene SJ16226 == * transcription-direction: ** positive * right-end-position: ** 12493 * left-end-position: ** 8639 * centisome-position: ** 1.2526826...")
(Created page with "Category:gene == Gene SJ10361 == * transcription-direction: ** negative * right-end-position: ** 486827 * left-end-position: ** 481854 * centisome-position: ** 59.559326...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16226 ==
+
== Gene SJ10361 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 12493
+
** 486827
 
* left-end-position:
 
* left-end-position:
−
** 8639
+
** 481854
 
* centisome-position:
 
* centisome-position:
−
** 1.2526826    
+
** 59.559326    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SAMDECARB-RXN]]
+
* [[3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[KETOPANTOALDOLASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[MOHMT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[MTMOHT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[BSUBPOLYAMSYN-PWY]]
+
* [[PANTO-PWY]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6834]]
+
* [[PWY-6654]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[ARGSPECAT-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=486827}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=481854}}
−
{{#set: right-end-position=12493}}
+
{{#set: centisome-position=59.559326   }}
−
{{#set: left-end-position=8639}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: centisome-position=1.2526826   }}
+
{{#set: nb reaction associated=5}}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb reaction associated=1}}
 
−
{{#set: nb pathway associated=3}}
 

Revision as of 14:49, 5 January 2021

Gene SJ10361

  • transcription-direction:
    • negative
  • right-end-position:
    • 486827
  • left-end-position:
    • 481854
  • centisome-position:
    • 59.559326

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PANTO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6654
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14141&oldid=56310"