Difference between revisions of "SJ14158"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ01689 == * transcription-direction: ** negative * right-end-position: ** 35512 * left-end-position: ** 28486 * centisome-position: ** 19.430178...")
(Created page with "Category:gene == Gene SJ14158 == * transcription-direction: ** positive * right-end-position: ** 322541 * left-end-position: ** 309232 * centisome-position: ** 43.041008...")
 
(6 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01689 ==
+
== Gene SJ14158 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 35512
+
** 322541
 
* left-end-position:
 
* left-end-position:
−
** 28486
+
** 309232
 
* centisome-position:
 
* centisome-position:
−
** 19.430178    
+
** 43.041008    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[AKBLIG-RXN]]
+
* [[ATPASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[THREONINE-DEG2-PWY]]
+
* [[PWY-6545]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY3DJ-12]]
+
* [[PWY-7210]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[SPHINGOLIPID-SYN-PWY]]
+
* [[PWY-7198]]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5129]]
+
* [[PWY-7184]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=35512}}
+
{{#set: right-end-position=322541}}
−
{{#set: left-end-position=28486}}
+
{{#set: left-end-position=309232}}
−
{{#set: centisome-position=19.430178   }}
+
{{#set: centisome-position=43.041008   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ14158

  • transcription-direction:
    • positive
  • right-end-position:
    • 322541
  • left-end-position:
    • 309232
  • centisome-position:
    • 43.041008

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14158&oldid=131926"