Difference between revisions of "SJ14167"

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(Created page with "Category:gene == Gene SJ13863 == * transcription-direction: ** positive * right-end-position: ** 43994 * left-end-position: ** 1713 * centisome-position: ** 0.5196436...")
(Created page with "Category:gene == Gene SJ13485 == * transcription-direction: ** negative * right-end-position: ** 119369 * left-end-position: ** 102412 * centisome-position: ** 30.516636...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13863 ==
+
== Gene SJ13485 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 43994
+
** 119369
 
* left-end-position:
 
* left-end-position:
−
** 1713
+
** 102412
 
* centisome-position:
 
* centisome-position:
−
** 0.5196436    
+
** 30.516636    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ALKAPHOSPHA-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[RXN-12587]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-5822]]
+
* [[RXN-12588]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8748]]
+
* [[RXN-14382]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14384]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14385]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14386]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15881]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9787]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-308]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SELENOCYSTEINE-LYASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[NAD-BIOSYNTHESIS-II]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6892]]
−
* [[NADPHOS-DEPHOS-PWY]]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7250]]
−
* [[PWY-5083]]
+
** '''5''' reactions found over '''10''' reactions in the full pathway
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-6891]]
−
* [[PWY-5491]]
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY0-1021]]
−
{{#set: transcription-direction=positive}}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: right-end-position=43994}}
+
* [[PWY-6823]]
−
{{#set: left-end-position=1713}}
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
{{#set: centisome-position=0.5196436   }}
+
* [[PWY-7904]]
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
{{#set: nb reaction associated=3}}
+
* [[PWY-7892]]
−
{{#set: nb pathway associated=4}}
+
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7891]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7889]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7888]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=119369}}
 +
{{#set: left-end-position=102412}}
 +
{{#set: centisome-position=30.516636   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=10}}
 +
{{#set: nb pathway associated=10}}

Revision as of 14:50, 5 January 2021

Gene SJ13485

  • transcription-direction:
    • negative
  • right-end-position:
    • 119369
  • left-end-position:
    • 102412
  • centisome-position:
    • 30.516636

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7250
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6891
    • 4 reactions found over 7 reactions in the full pathway
  • PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6823
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7904
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7892
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-7891
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7889
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7888
    • 2 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14167&oldid=56751"