Difference between revisions of "SJ14175"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14483 CPD-14483] == * common-name: ** glycyrrhetinate * smiles: ** cc4(c)(c3(ccc2(c)(c1(c)(...")
 
(Created page with "Category:gene == Gene SJ14175 == * transcription-direction: ** positive * right-end-position: ** 564341 * left-end-position: ** 552588 * centisome-position: ** 76.91295...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14483 CPD-14483] ==
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== Gene SJ14175 ==
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* common-name:
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* transcription-direction:
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** glycyrrhetinate
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** positive
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* smiles:
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* right-end-position:
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** cc4(c)(c3(ccc2(c)(c1(c)(ccc5([ch](c1=cc(c2c(c)3ccc(o)4)=o)cc(c([o-])=o)(c)cc5)c))))
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** 564341
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* inchi-key:
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* left-end-position:
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** mpdghejmbkotsu-vopryamfsa-m
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** 552588
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* molecular-weight:
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* centisome-position:
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** 469.683
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** 76.91295   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-13494]]
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== Reaction(s) associated ==
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* [[RXN-13506]]
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=glycyrrhetinate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=mpdghejmbkotsu-vopryamfsa-m}}
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* [[F16BDEPHOS-RXN]]
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{{#set: molecular-weight=469.683}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[SUGAR-PHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[CALVIN-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[GLUCONEO-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5484]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[GLYCOLYSIS]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[P185-PWY]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[PWY66-399]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[SUCSYN-PWY]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=564341}}
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{{#set: left-end-position=552588}}
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{{#set: centisome-position=76.91295    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:00, 18 March 2021

Gene SJ14175

  • transcription-direction:
    • positive
  • right-end-position:
    • 564341
  • left-end-position:
    • 552588
  • centisome-position:
    • 76.91295

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14175&oldid=131767"