Difference between revisions of "SJ14225"

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(Created page with "Category:gene == Gene SJ08953 == * transcription-direction: ** negative * right-end-position: ** 119860 * left-end-position: ** 116617 * centisome-position: ** 27.213707...")
(Created page with "Category:gene == Gene SJ14225 == * transcription-direction: ** positive * right-end-position: ** 272952 * left-end-position: ** 255465 * centisome-position: ** 78.97934...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08953 ==
+
== Gene SJ14225 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 119860
+
** 272952
 
* left-end-position:
 
* left-end-position:
−
** 116617
+
** 255465
 
* centisome-position:
 
* centisome-position:
−
** 27.213707    
+
** 78.97934    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
+
* [[RXN-11601]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14177]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[GLYOXIII-RXN]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[orthology]]
+
{{#set: right-end-position=272952}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=255465}}
−
* [[HPPD]]
+
{{#set: centisome-position=78.97934   }}
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10815]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7432]]
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
−
* [[TYRFUMCAT-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-1581]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-1422]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6318]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=119860}}
 
−
{{#set: left-end-position=116617}}
 
−
{{#set: centisome-position=27.213707   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=5}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ14225

  • transcription-direction:
    • positive
  • right-end-position:
    • 272952
  • left-end-position:
    • 255465
  • centisome-position:
    • 78.97934

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14225&oldid=135043"