Difference between revisions of "SJ14225"
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(Created page with "Category:gene == Gene SJ08953 == * transcription-direction: ** negative * right-end-position: ** 119860 * left-end-position: ** 116617 * centisome-position: ** 27.213707...") |
(Created page with "Category:gene == Gene SJ20140 == * transcription-direction: ** negative * right-end-position: ** 71287 * left-end-position: ** 56133 * centisome-position: ** 26.430706...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20140 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 71287 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 56133 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 26.430706 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[4- | + | * [[PYRIDOXINE-4-DEHYDROGENASE-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-1884]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7204]] |
| − | ** ''' | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
| − | + | * [[PWY-7282]] | |
| − | + | ** '''6''' reactions found over '''10''' reactions in the full pathway | |
| − | * [[PWY- | + | * [[PWY-882]] |
| − | ** ''' | + | ** '''6''' reactions found over '''8''' reactions in the full pathway |
| − | * [[PWY- | ||
| − | ** ''' | ||
| − | |||
| − | |||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=71287}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=56133}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=26.430706 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 15:21, 5 January 2021
Contents
Gene SJ20140
- transcription-direction:
- negative
- right-end-position:
- 71287
- left-end-position:
- 56133
- centisome-position:
- 26.430706
Organism(s) associated with this gene
Reaction(s) associated
- PYRIDOXINE-4-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-1884
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-7204
- 9 reactions found over 9 reactions in the full pathway
- PWY-7282
- 6 reactions found over 10 reactions in the full pathway
- PWY-882
- 6 reactions found over 8 reactions in the full pathway
