Difference between revisions of "SJ14436"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6 6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6] == * common-name: ** (5s)-...")
(Created page with "Category:gene == Gene SJ14436 == * transcription-direction: ** positive * right-end-position: ** 239323 * left-end-position: ** 226148 * centisome-position: ** 71.42997...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6 6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6] ==
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== Gene SJ14436 ==
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* common-name:
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* transcription-direction:
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** (5s)-hpete
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** positive
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* smiles:
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* right-end-position:
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** cccccc=ccc=ccc=cc=cc(oo)cccc([o-])=o
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** 239323
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* inchi-key:
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* left-end-position:
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** jnuunuqhxiofda-jgklhwiesa-m
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** 226148
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* molecular-weight:
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* centisome-position:
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** 335.462
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** 71.42997   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-8647]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
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* [[PNKIN-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(5s)-hpete}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=jnuunuqhxiofda-jgklhwiesa-m}}
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** Category: [[orthology]]
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{{#set: molecular-weight=335.462}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PYRAMKIN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PYRIDOXKIN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PLPSAL-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7204]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7282]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=239323}}
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{{#set: left-end-position=226148}}
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{{#set: centisome-position=71.42997    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=3}}

Latest revision as of 11:03, 18 March 2021

Gene SJ14436

  • transcription-direction:
    • positive
  • right-end-position:
    • 239323
  • left-end-position:
    • 226148
  • centisome-position:
    • 71.42997

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7204
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7282
    • 6 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14436&oldid=132964"