Difference between revisions of "SJ14442"

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(Created page with "Category:gene == Gene SJ21412 == * transcription-direction: ** positive * right-end-position: ** 121891 * left-end-position: ** 113875 * centisome-position: ** 58.89274...")
(Created page with "Category:gene == Gene SJ19199 == * transcription-direction: ** negative * right-end-position: ** 186308 * left-end-position: ** 162522 * centisome-position: ** 70.43085...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21412 ==
+
== Gene SJ19199 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 121891
+
** 186308
 
* left-end-position:
 
* left-end-position:
−
** 113875
+
** 162522
 
* centisome-position:
 
* centisome-position:
−
** 58.89274    
+
** 70.43085    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-7163]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.23-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[3.1.1.64-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[CARBOXYLESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15088]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15089]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6554]]
+
* [[LIPAS-PWY]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-4661]]
+
* [[PWY-6303]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6372]]
+
* [[PWY-6857]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6361]]
+
* [[PWY-7420]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6362]]
+
{{#set: transcription-direction=negative}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=186308}}
−
* [[PWY-6369]]
+
{{#set: left-end-position=162522}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=70.43085   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=121891}}
 
−
{{#set: left-end-position=113875}}
 
−
{{#set: centisome-position=58.89274   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Revision as of 13:04, 14 January 2021

Gene SJ19199

  • transcription-direction:
    • negative
  • right-end-position:
    • 186308
  • left-end-position:
    • 162522
  • centisome-position:
    • 70.43085

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • LIPAS-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7420
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14442&oldid=83123"