Difference between revisions of "SJ14476"

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(Created page with "Category:gene == Gene SJ04586 == * transcription-direction: ** positive * right-end-position: ** 36804 * left-end-position: ** 17554 * centisome-position: ** 16.736586...")
(Created page with "Category:gene == Gene SJ14476 == * transcription-direction: ** negative * right-end-position: ** 255520 * left-end-position: ** 253437 * centisome-position: ** 80.74791...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04586 ==
+
== Gene SJ14476 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 36804
+
** 255520
 
* left-end-position:
 
* left-end-position:
−
** 17554
+
** 253437
 
* centisome-position:
 
* centisome-position:
−
** 16.736586    
+
** 80.74791    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
+
* [[1.1.3.37-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[1.1.3.41-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-9926]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY3O-6]]
−
* [[ILEUSYN-PWY]]
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[ILEUDEG-PWY]]
+
{{#set: right-end-position=255520}}
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: left-end-position=253437}}
−
* [[PWY-5078]]
+
{{#set: centisome-position=80.74791   }}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5103]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5104]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5101]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5108]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[LEU-DEG2-PWY]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5076]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7767]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[LEUSYN-PWY]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[VALSYN-PWY]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ALANINE-VALINESYN-PWY]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5057]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[VALDEG-PWY]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=36804}}
 
−
{{#set: left-end-position=17554}}
 
−
{{#set: centisome-position=16.736586   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=15}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:02, 18 March 2021

Gene SJ14476

  • transcription-direction:
    • negative
  • right-end-position:
    • 255520
  • left-end-position:
    • 253437
  • centisome-position:
    • 80.74791

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY3O-6
    • 1 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14476&oldid=132277"