Difference between revisions of "SJ14523"

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(Created page with "Category:gene == Gene SJ10685 == * transcription-direction: ** negative * right-end-position: ** 20740 * left-end-position: ** 18452 * centisome-position: ** 2.3413212...")
(Created page with "Category:gene == Gene SJ00685 == * transcription-direction: ** positive * right-end-position: ** 84007 * left-end-position: ** 26457 * centisome-position: ** 16.208418...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10685 ==
+
== Gene SJ00685 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 20740
+
** 84007
 
* left-end-position:
 
* left-end-position:
−
** 18452
+
** 26457
 
* centisome-position:
 
* centisome-position:
−
** 2.3413212    
+
** 16.208418    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.3.16-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12196]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
{{#set: transcription-direction=negative}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: right-end-position=20740}}
+
* [[RXN0-5462]]
−
{{#set: left-end-position=18452}}
+
** Category: [[annotation]]
−
{{#set: centisome-position=2.3413212   }}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
== Pathway(s) associated ==
−
{{#set: nb reaction associated=3}}
+
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=84007}}
 +
{{#set: left-end-position=26457}}
 +
{{#set: centisome-position=16.208418   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:24, 18 December 2020

Gene SJ00685

  • transcription-direction:
    • positive
  • right-end-position:
    • 84007
  • left-end-position:
    • 26457
  • centisome-position:
    • 16.208418

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14523&oldid=43052"