Difference between revisions of "SJ14528"
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(Created page with "Category:gene == Gene SJ03359 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-9839 ** Category:...") |
(Created page with "Category:gene == Gene SJ14528 == * transcription-direction: ** positive * right-end-position: ** 436505 * left-end-position: ** 415962 * centisome-position: ** 58.36941...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ14528 == |
| + | * transcription-direction: | ||
| + | ** positive | ||
| + | * right-end-position: | ||
| + | ** 436505 | ||
| + | * left-end-position: | ||
| + | ** 415962 | ||
| + | * centisome-position: | ||
| + | ** 58.36941 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN- | + | * [[ACETYL-COA-CARBOXYLTRANSFER-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[ACOACXr]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[BIOTIN-CARBOXYL-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN0-5055]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7388]] |
| − | ** '''3''' reactions found over ''' | + | ** '''7''' reactions found over '''11''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6679]] |
| + | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY0-1264]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5744]] | ||
| + | ** '''4''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[PWY-5743]] | ||
| + | ** '''5''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[PWY-5789]] | ||
| + | ** '''8''' reactions found over '''18''' reactions in the full pathway | ||
| + | * [[PWY-6722]] | ||
| + | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-4381]] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=436505}} | ||
| + | {{#set: left-end-position=415962}} | ||
| + | {{#set: centisome-position=58.36941 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=8}} |
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ14528
- transcription-direction:
- positive
- right-end-position:
- 436505
- left-end-position:
- 415962
- centisome-position:
- 58.36941
Organism(s) associated with this gene
Reaction(s) associated
- ACETYL-COA-CARBOXYLTRANSFER-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- ACOACXr
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- BIOTIN-CARBOXYL-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5055
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7388
- 7 reactions found over 11 reactions in the full pathway
- PWY-6679
- 1 reactions found over 9 reactions in the full pathway
- PWY0-1264
- 3 reactions found over 4 reactions in the full pathway
- PWY-5744
- 4 reactions found over 13 reactions in the full pathway
- PWY-5743
- 5 reactions found over 13 reactions in the full pathway
- PWY-5789
- 8 reactions found over 18 reactions in the full pathway
- PWY-6722
- 1 reactions found over 6 reactions in the full pathway
- PWY-4381
- 3 reactions found over 3 reactions in the full pathway
