Difference between revisions of "SJ14529"

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(Created page with "Category:gene == Gene SJ02536 == * transcription-direction: ** negative * right-end-position: ** 21818 * left-end-position: ** 1177 * centisome-position: ** 0.882084 =...")
(Created page with "Category:gene == Gene SJ14529 == * transcription-direction: ** positive * right-end-position: ** 474414 * left-end-position: ** 436978 * centisome-position: ** 61.31846...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02536 ==
+
== Gene SJ14529 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 21818
+
** 474414
 
* left-end-position:
 
* left-end-position:
−
** 1177
+
** 436978
 
* centisome-position:
 
* centisome-position:
−
** 0.882084    
+
** 61.31846    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[HISTONE-ACETYLTRANSFERASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACOACXr]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[BIOTIN-CARBOXYL-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[RXN0-5055]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-7388]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6679]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY0-1264]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-5744]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''13''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5743]]
−
{{#set: right-end-position=21818}}
+
** '''5''' reactions found over '''13''' reactions in the full pathway
−
{{#set: left-end-position=1177}}
+
* [[PWY-5789]]
−
{{#set: centisome-position=0.882084   }}
+
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-6722]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-4381]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=474414}}
 +
{{#set: left-end-position=436978}}
 +
{{#set: centisome-position=61.31846   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=8}}

Latest revision as of 11:01, 18 March 2021

Gene SJ14529

  • transcription-direction:
    • positive
  • right-end-position:
    • 474414
  • left-end-position:
    • 436978
  • centisome-position:
    • 61.31846

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7388
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-6722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-4381
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14529&oldid=132103"