Difference between revisions of "SJ14627"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ02123 == * transcription-direction: ** negative * right-end-position: ** 17320 * left-end-position: ** 12475 * centisome-position: ** 8.820556...")
(Created page with "Category:gene == Gene SJ14627 == * transcription-direction: ** positive * right-end-position: ** 134363 * left-end-position: ** 129662 * centisome-position: ** 41.629852...")
 
(3 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02123 ==
+
== Gene SJ14627 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 17320
+
** 134363
 
* left-end-position:
 
* left-end-position:
−
** 12475
+
** 129662
 
* centisome-position:
 
* centisome-position:
−
** 8.820556    
+
** 41.629852    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.3.16-RXN]]
−
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-KINASE-RXN]]
+
* [[PGPPHOSPHA-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8443]]
+
* [[RXN-13313]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY4FS-7]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-7817]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY0-1545]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-5269]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5381]]
+
* [[PWY-5668]]
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY4FS-8]]
−
{{#set: right-end-position=17320}}
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=12475}}
+
* [[PWY-6368]]
−
{{#set: centisome-position=8.820556   }}
+
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=134363}}
 +
{{#set: left-end-position=129662}}
 +
{{#set: centisome-position=41.629852   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:05, 18 March 2021

Gene SJ14627

  • transcription-direction:
    • positive
  • right-end-position:
    • 134363
  • left-end-position:
    • 129662
  • centisome-position:
    • 41.629852

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY4FS-7
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway
  • PWY0-1545
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5269
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5668
    • 3 reactions found over 3 reactions in the full pathway
  • PWY4FS-8
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14627&oldid=133780"