Difference between revisions of "SJ14634"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ17320 == * transcription-direction: ** negative * right-end-position: ** 195145 * left-end-position: ** 184636 * centisome-position: ** 69.91246...")
(Created page with "Category:gene == Gene SJ14634 == * transcription-direction: ** positive * right-end-position: ** 39590 * left-end-position: ** 19075 * centisome-position: ** 6.127057...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ17320 ==
+
== Gene SJ14634 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 195145
+
** 39590
 
* left-end-position:
 
* left-end-position:
** 184636
+
** 19075
 
* centisome-position:
 
* centisome-position:
** 69.91246    
+
** 6.127057    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[RXN-14177]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[F16BDEPHOS-RXN]]
+
* [[RXN-16889]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[RXN-16891]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[RXN-17121]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[SUGAR-PHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
* [[P185-PWY]]
+
{{#set: right-end-position=39590}}
** '''11''' reactions found over '''12''' reactions in the full pathway
+
{{#set: left-end-position=19075}}
* [[PWY66-399]]
+
{{#set: centisome-position=6.127057   }}
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[SUCSYN-PWY]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[CALVIN-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[GLUCONEO-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=195145}}
 
{{#set: left-end-position=184636}}
 
{{#set: centisome-position=69.91246   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=4}}
 
{{#set: nb reaction associated=4}}
{{#set: nb pathway associated=7}}
 

Latest revision as of 11:08, 18 March 2021

Gene SJ14634

  • transcription-direction:
    • positive
  • right-end-position:
    • 39590
  • left-end-position:
    • 19075
  • centisome-position:
    • 6.127057

Organism(s) associated with this gene

Reaction(s) associated