Difference between revisions of "SJ14670"

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(Created page with "Category:gene == Gene SJ07398 == * transcription-direction: ** negative * right-end-position: ** 29459 * left-end-position: ** 27019 * centisome-position: ** 39.709297...")
(Created page with "Category:gene == Gene SJ14670 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07398 ==
+
== Gene SJ14670 ==
−
* transcription-direction:
 
−
** negative
 
−
* right-end-position:
 
−
** 29459
 
−
* left-end-position:
 
−
** 27019
 
−
* centisome-position:
 
−
** 39.709297   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[2.4.1.223-RXN]]
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* [[NARINGENIN-3-DIOXYGENASE-RXN]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10606]]
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* [[RXN-113]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10607]]
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* [[RXN-115]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10608]]
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* [[RXN-171]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10609]]
+
* [[RXN-527]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10616]]
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* [[RXN-602]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10617]]
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* [[RXN-6550]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10618]]
+
* [[RXN-7648]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10619]]
+
* [[RXN-7775]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10784]]
+
* [[RXN-7922]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11060]]
+
* [[RXN-8450]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13607]]
+
* [[RXN1F-162]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13608]]
+
* [[RXN1F-163]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14361]]
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* [[RXN1F-165]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-9000]]
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* [[RXN1F-167]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN66-162]]
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* [[RXN1F-168]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN66-168]]
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* [[RXN1F-93]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN66-83]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6558]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''7''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY1F-FLAVSYN]]
−
* [[PWY-6261]]
 
−
** '''10''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-6313]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6398]]
 
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5756]]
+
* [[PWY-6787]]
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY66-221]]
+
* [[PWY-102]]
−
** '''5''' reactions found over '''18''' reactions in the full pathway
+
** '''4''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY66-201]]
+
* [[PWY-5390]]
−
** '''3''' reactions found over '''16''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-3101]]
−
{{#set: right-end-position=29459}}
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=27019}}
+
* [[PWY-5059]]
−
{{#set: centisome-position=39.709297    }}
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY1F-823]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5152]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5391]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5070]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5035]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
</div>
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=19}}
+
{{#set: nb reaction associated=17}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=11}}

Latest revision as of 11:07, 18 March 2021

Gene SJ14670

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6787
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-102
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-5390
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3101
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5059
    • 3 reactions found over 5 reactions in the full pathway
  • PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5152
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5391
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5070
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5035
    • 2 reactions found over 7 reactions in the full pathway


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