Difference between revisions of "SJ14758"

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(Created page with "Category:gene == Gene SJ10502 == * transcription-direction: ** positive * right-end-position: ** 105289 * left-end-position: ** 93816 * centisome-position: ** 24.124231...")
(Created page with "Category:gene == Gene SJ14758 == * transcription-direction: ** negative * right-end-position: ** 229977 * left-end-position: ** 202561 * centisome-position: ** 28.445423...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ10502 ==
+
== Gene SJ14758 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 105289
+
** 229977
 
* left-end-position:
 
* left-end-position:
** 93816
+
** 202561
 
* centisome-position:
 
* centisome-position:
** 24.124231    
+
** 28.445423    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.7.7.64-RXN]]
+
* [[CYSTEINE-DIOXYGENASE-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[GLUC1PURIDYLTRANS-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[UG1PUT]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[UTPHEXPURIDYLYLTRANS-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7817]]
+
* [[CYSTEINE-DEG-PWY]]
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-7238]]
+
* [[PWY-5331]]
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6527]]
+
{{#set: transcription-direction=negative}}
** '''7''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=229977}}
* [[PWY-3801]]
+
{{#set: left-end-position=202561}}
** '''4''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=28.445423   }}
* [[PWY-7343]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: nb reaction associated=1}}
* [[PWY-3821]]
+
{{#set: nb pathway associated=2}}
** '''3''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=105289}}
 
{{#set: left-end-position=93816}}
 
{{#set: centisome-position=24.124231   }}
 
{{#set: organism associated=S.japonica_sterols_curated}}
 
{{#set: nb reaction associated=4}}
 
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:05, 18 March 2021

Gene SJ14758

  • transcription-direction:
    • negative
  • right-end-position:
    • 229977
  • left-end-position:
    • 202561
  • centisome-position:
    • 28.445423

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CYSTEINE-DEG-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5331
    • 1 reactions found over 5 reactions in the full pathway