Difference between revisions of "SJ14783"
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(Created page with "Category:gene == Gene SJ03349 == * transcription-direction: ** positive * right-end-position: ** 57227 * left-end-position: ** 51925 * centisome-position: ** 42.460545...") |
(Created page with "Category:gene == Gene SJ21118 == * transcription-direction: ** negative * right-end-position: ** 469783 * left-end-position: ** 463339 * centisome-position: ** 76.66086...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ21118 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 469783 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 463339 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 76.66086 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[PMPOXI-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[PNPOXI-RXN]] |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | == Pathway(s) associated == |
| − | ** | + | * [[PLPSAL-PWY]] |
| − | *** | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7204]] |
| − | {{#set: right-end-position= | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PYRIDOXSYN-PWY]] |
| − | {{#set: centisome-position= | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
| + | * [[PWY-7282]] | ||
| + | ** '''6''' reactions found over '''10''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=469783}} | ||
| + | {{#set: left-end-position=463339}} | ||
| + | {{#set: centisome-position=76.66086 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated=4}} | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=4}} | ||
Revision as of 11:03, 15 January 2021
Contents
Gene SJ21118
- transcription-direction:
- negative
- right-end-position:
- 469783
- left-end-position:
- 463339
- centisome-position:
- 76.66086
Organism(s) associated with this gene
Reaction(s) associated
- PMPOXI-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PNPOXI-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PLPSAL-PWY
- 5 reactions found over 5 reactions in the full pathway
- PWY-7204
- 9 reactions found over 9 reactions in the full pathway
- PYRIDOXSYN-PWY
- 3 reactions found over 7 reactions in the full pathway
- PWY-7282
- 6 reactions found over 10 reactions in the full pathway
