Difference between revisions of "SJ14783"

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(Created page with "Category:gene == Gene SJ21118 == * transcription-direction: ** negative * right-end-position: ** 469783 * left-end-position: ** 463339 * centisome-position: ** 76.66086...")
(Created page with "Category:gene == Gene SJ06911 == * transcription-direction: ** positive * right-end-position: ** 32975 * left-end-position: ** 21259 * centisome-position: ** 29.17267...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21118 ==
+
== Gene SJ06911 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 469783
+
** 32975
 
* left-end-position:
 
* left-end-position:
−
** 463339
+
** 21259
 
* centisome-position:
 
* centisome-position:
−
** 76.66086    
+
** 29.17267    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PMPOXI-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.7.10.1-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[3.6.4.4-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PNPOXI-RXN]]
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
</div>
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PLPSAL-PWY]]
+
* [[PWY-7210]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7204]]
+
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PYRIDOXSYN-PWY]]
+
* [[PWY-6545]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7282]]
+
{{#set: transcription-direction=positive}}
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
{{#set: right-end-position=32975}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=21259}}
−
{{#set: right-end-position=469783}}
+
{{#set: centisome-position=29.17267   }}
−
{{#set: left-end-position=463339}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: centisome-position=76.66086   }}
+
{{#set: nb reaction associated=8}}
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=2}}
 
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}

Revision as of 14:45, 5 January 2021

Gene SJ06911

  • transcription-direction:
    • positive
  • right-end-position:
    • 32975
  • left-end-position:
    • 21259
  • centisome-position:
    • 29.17267

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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