Difference between revisions of "SJ14812"

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(Created page with "Category:gene == Gene SJ13560 == * transcription-direction: ** positive * right-end-position: ** 188391 * left-end-position: ** 173065 * centisome-position: ** 51.871777...")
(Created page with "Category:gene == Gene SJ14812 == * transcription-direction: ** negative * right-end-position: ** 178737 * left-end-position: ** 158520 * centisome-position: ** 39.499256...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ13560 ==
+
== Gene SJ14812 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 188391
+
** 178737
 
* left-end-position:
 
* left-end-position:
** 173065
+
** 158520
 
* centisome-position:
 
* centisome-position:
** 51.871777    
+
** 39.499256    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[F16ALDOLASE-RXN]]
+
* [[3.5.1.98-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-8631]]
+
{{#set: transcription-direction=negative}}
** Category: [[annotation]]
+
{{#set: right-end-position=178737}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=158520}}
** Category: [[orthology]]
+
{{#set: centisome-position=39.499256   }}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[CALVIN-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[GLUCONEO-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-7385]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[P341-PWY]]
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[ANAGLYCOLYSIS-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY66-399]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-1042]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[SUCSYN-PWY]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[P185-PWY]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-1861]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-6142]]
 
** '''10''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY66-373]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=188391}}
 
{{#set: left-end-position=173065}}
 
{{#set: centisome-position=51.871777   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=14}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ14812

  • transcription-direction:
    • negative
  • right-end-position:
    • 178737
  • left-end-position:
    • 158520
  • centisome-position:
    • 39.499256

Organism(s) associated with this gene

Reaction(s) associated