Difference between revisions of "SJ14827"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SN-GERANYLGERANYLGLYCERYL-1-PHOSPHATE SN-GERANYLGERANYLGLYCERYL-1-PHOSPHATE] == * common-name:...")
(Created page with "Category:gene == Gene SJ21593 == * transcription-direction: ** positive * right-end-position: ** 150953 * left-end-position: ** 141609 * centisome-position: ** 74.57423...")
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SN-GERANYLGERANYLGLYCERYL-1-PHOSPHATE SN-GERANYLGERANYLGLYCERYL-1-PHOSPHATE] ==
+
== Gene SJ21593 ==
−
* common-name:
+
* transcription-direction:
−
** 3-(o-geranylgeranyl)-sn-glycerol 1-phosphate
+
** positive
−
* smiles:
+
* right-end-position:
−
** cc(c)=cccc(c)=cccc(c)=cccc(c)=ccocc(cop([o-])([o-])=o)o
+
** 150953
−
* inchi-key:
+
* left-end-position:
−
** bjlpwucpfajinb-uaqstnrtsa-l
+
** 141609
−
* molecular-weight:
+
* centisome-position:
−
** 442.531
+
** 74.57423   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[2.5.1.42-RXN]]
+
* [[S.japonica_sterols_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
* [[2.5.1.41-RXN]]
+
* [[CDPDIGLYSYN-RXN]]
−
== Reaction(s) of unknown directionality ==
+
** Category: [[orthology]]
−
{{#set: common-name=3-(o-geranylgeranyl)-sn-glycerol 1-phosphate}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: inchi-key=inchikey=bjlpwucpfajinb-uaqstnrtsa-l}}
+
* [[RXN-7683]]
−
{{#set: molecular-weight=442.531}}
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5515]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-5981]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1319]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5667]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7817]]
 +
** '''6''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-5107]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=150953}}
 +
{{#set: left-end-position=141609}}
 +
{{#set: centisome-position=74.57423    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=5}}

Revision as of 20:21, 18 December 2020

Gene SJ21593

  • transcription-direction:
    • positive
  • right-end-position:
    • 150953
  • left-end-position:
    • 141609
  • centisome-position:
    • 74.57423

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway
  • PWY-5107
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14827&oldid=41768"