Difference between revisions of "SJ14916"

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(Created page with "Category:gene == Gene SJ07398 == * transcription-direction: ** negative * right-end-position: ** 29459 * left-end-position: ** 27019 * centisome-position: ** 39.709297...")
 
(Created page with "Category:gene == Gene SJ18183 == * transcription-direction: ** negative * right-end-position: ** 119252 * left-end-position: ** 115282 * centisome-position: ** 45.860386...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07398 ==
+
== Gene SJ18183 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 29459
+
** 119252
 
* left-end-position:
 
* left-end-position:
−
** 27019
+
** 115282
 
* centisome-position:
 
* centisome-position:
−
** 39.709297    
+
** 45.860386    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[2.4.1.223-RXN]]
+
* [[OHMETPYRKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10606]]
+
* [[PYRIMSYN3-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10607]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12610]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10608]]
+
* [[RXN-12611]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10609]]
+
* [[THI-P-SYN-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10616]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10617]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10618]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10619]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10784]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11060]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13607]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13608]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14361]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9000]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-162]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-168]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-83]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6558]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''7''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-6910]]
−
* [[PWY-6261]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
** '''10''' reactions found over '''15''' reactions in the full pathway
+
* [[PWY-7357]]
−
* [[PWY-6313]]
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7356]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6398]]
+
* [[PWY-6890]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5756]]
+
* [[PWY-7282]]
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY66-221]]
+
* [[PWY-6907]]
−
** '''5''' reactions found over '''18''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY66-201]]
+
* [[PWY-6893]]
−
** '''3''' reactions found over '''16''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6894]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6908]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6897]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=29459}}
+
{{#set: right-end-position=119252}}
−
{{#set: left-end-position=27019}}
+
{{#set: left-end-position=115282}}
−
{{#set: centisome-position=39.709297   }}
+
{{#set: centisome-position=45.860386   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=19}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=10}}

Revision as of 14:23, 26 August 2019

Gene SJ18183

  • transcription-direction:
    • negative
  • right-end-position:
    • 119252
  • left-end-position:
    • 115282
  • centisome-position:
    • 45.860386

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6910
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7357
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7356
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6890
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7282
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6907
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6893
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6894
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6908
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6897
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14916&oldid=19396"