Difference between revisions of "SJ14921"

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(Created page with "Category:gene == Gene SJ12140 == * transcription-direction: ** negative * right-end-position: ** 325524 * left-end-position: ** 323701 * centisome-position: ** 89.53493...")
(Created page with "Category:gene == Gene SJ10245 == * transcription-direction: ** positive * right-end-position: ** 82289 * left-end-position: ** 65643 * centisome-position: ** 16.648659...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12140 ==
+
== Gene SJ10245 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 325524
+
** 82289
 
* left-end-position:
 
* left-end-position:
−
** 323701
+
** 65643
 
* centisome-position:
 
* centisome-position:
−
** 89.53493    
+
** 16.648659    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETOACETATE--COA-LIGASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ACETOLACTREDUCTOISOM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
** Category: [[orthology]]
−
{{#set: right-end-position=325524}}
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
{{#set: left-end-position=323701}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: centisome-position=89.53493   }}
+
* [[ACETOOHBUTREDUCTOISOM-RXN]]
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
** Category: [[annotation]]
−
{{#set: nb reaction associated=1}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[KARI_LPAREN_23dhmb_RPAREN_]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[KARI_LPAREN_23dhmp_RPAREN_]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14106]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[VALSYN-PWY]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7111]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[ILEUSYN-PWY]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5103]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=82289}}
 +
{{#set: left-end-position=65643}}
 +
{{#set: centisome-position=16.648659   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:24, 18 December 2020

Gene SJ10245

  • transcription-direction:
    • positive
  • right-end-position:
    • 82289
  • left-end-position:
    • 65643
  • centisome-position:
    • 16.648659

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • VALSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7111
    • 4 reactions found over 5 reactions in the full pathway
  • ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5103
    • 3 reactions found over 7 reactions in the full pathway




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