Difference between revisions of "SJ15041"

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(Created page with "Category:gene == Gene SJ09463 == * transcription-direction: ** negative * right-end-position: ** 413302 * left-end-position: ** 403350 * centisome-position: ** 97.07815...")
(Created page with "Category:gene == Gene SJ15041 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * DNA-DIRECTED-DNA-POLYMER...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ09463 ==
+
== Gene SJ15041 ==
* transcription-direction:
 
** negative
 
* right-end-position:
 
** 413302
 
* left-end-position:
 
** 403350
 
* centisome-position:
 
** 97.07815   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[CYCLOEUCALENOL-CYCLOISOMERASE-RXN]]
+
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN11876]]
+
* [[RXN-10821]]
** Category: [[manual]]
+
** Category: [[orthology]]
*** source: [[reaction_creator_sjap]]; tool: [[unknown-tool]]; comment: curation sterols (girard et al.)
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13112]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8032]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7155]]
+
* [[PWY-6318]]
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
* [[PWY-2541]]
+
* [[P321-PWY]]
** '''11''' reactions found over '''35''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
* [[PWY-8191]]
+
* [[PWY-7401]]
** '''15''' reactions found over '''n.a''' reactions in the full pathway
+
** '''6''' reactions found over '''15''' reactions in the full pathway
{{#set: transcription-direction=negative}}
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* [[CENTBENZCOA-PWY]]
{{#set: right-end-position=413302}}
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** '''1''' reactions found over '''7''' reactions in the full pathway
{{#set: left-end-position=403350}}
 
{{#set: centisome-position=97.07815    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:09, 18 March 2021

Gene SJ15041

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6318
    • 4 reactions found over 9 reactions in the full pathway
  • P321-PWY
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-7401
    • 6 reactions found over 15 reactions in the full pathway
  • CENTBENZCOA-PWY
    • 1 reactions found over 7 reactions in the full pathway