Difference between revisions of "SJ15054"

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(Created page with "Category:gene == Gene SJ01932 == * transcription-direction: ** positive * right-end-position: ** 114343 * left-end-position: ** 110218 * centisome-position: ** 76.66699...")
(Created page with "Category:gene == Gene SJ15054 == * transcription-direction: ** positive * right-end-position: ** 178240 * left-end-position: ** 174875 * centisome-position: ** 57.67607...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01932 ==
+
== Gene SJ15054 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 114343
+
** 178240
 
* left-end-position:
 
* left-end-position:
−
** 110218
+
** 174875
 
* centisome-position:
 
* centisome-position:
−
** 76.66699    
+
** 57.67607    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PMPOXI-RXN]]
+
* [[TRIMETHYLLYSINE-DIOXYGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PNPOXI-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PYRIDOXINE-4-OXIDASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PLPSAL-PWY]]
+
* [[PWY-6100]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7204]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PYRIDOXSYN-PWY]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7282]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5499]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=114343}}
+
{{#set: right-end-position=178240}}
−
{{#set: left-end-position=110218}}
+
{{#set: left-end-position=174875}}
−
{{#set: centisome-position=76.66699   }}
+
{{#set: centisome-position=57.67607   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:05, 18 March 2021

Gene SJ15054

  • transcription-direction:
    • positive
  • right-end-position:
    • 178240
  • left-end-position:
    • 174875
  • centisome-position:
    • 57.67607

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6100
    • 3 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15054&oldid=133806"