Difference between revisions of "SJ15067"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ06616 == * transcription-direction: ** negative * right-end-position: ** 471261 * left-end-position: ** 464608 * centisome-position: ** 98.36200...")
(Created page with "Category:gene == Gene SJ15067 == * transcription-direction: ** positive * right-end-position: ** 129025 * left-end-position: ** 121627 * centisome-position: ** 40.164253...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06616 ==
+
== Gene SJ15067 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 471261
+
** 129025
 
* left-end-position:
 
* left-end-position:
−
** 464608
+
** 121627
 
* centisome-position:
 
* centisome-position:
−
** 98.36200    
+
** 40.164253    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[MANNPISOM-RXN]]
−
* [[3-HYDROXYDECANOYL-ACP-DEHYDR-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[3-OXOACYL-ACP-REDUCT-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[3-OXOACYL-ACP-SYNTH-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[4.2.1.58-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[4.2.1.59-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[4.2.1.61-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ACP-S-ACETYLTRANSFER-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ENOYL-ACP-REDUCT-NADPH-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[FATTY-ACID-SYNTHASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[MALONYL-COA-ACP-TRANSACYL-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13008]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13294]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13295]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13296]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13297]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13322]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13441]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14492]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16094]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16153]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7697]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9514]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9515]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9518]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9520]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9521]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9524]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9526]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9528]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9530]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9532]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9533]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9534]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9535]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9536]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9537]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9538]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9540]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9542]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9543]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9648]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9650]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9651]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9652]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9653]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9654]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9655]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-3861]]
−
* [[FASYN-ELONG-PWY]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-5659]]
−
* [[PWY-7388]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-7586]]
−
* [[PWY-5966]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''2''' reactions found over '''n.a''' reactions in the full pathway
+
* [[PWY-7456]]
−
* [[PWY-5965]]
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
** '''1''' reactions found over '''n.a''' reactions in the full pathway
+
* [[PWY-6992]]
−
* [[FASYN-INITIAL-PWY]]
 
−
** '''5''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5971]]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-5994]]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-4381]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6799]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7036]]
 
−
** '''14''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-6433]]
 
−
** '''17''' reactions found over '''22''' reactions in the full pathway
 
−
* [[PWY-7724]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7619]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7602]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7725]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6598]]
 
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7601]]
+
* [[PWY-882]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5080]]
+
* [[PWY-3881]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7664]]
+
* [[MANNCAT-PWY]]
−
** '''13''' reactions found over '''14''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5972]]
+
{{#set: transcription-direction=positive}}
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=129025}}
−
* [[PWY0-862]]
+
{{#set: left-end-position=121627}}
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=40.164253   }}
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=471261}}
 
−
{{#set: left-end-position=464608}}
 
−
{{#set: centisome-position=98.36200   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=48}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=21}}
+
{{#set: nb pathway associated=8}}

Latest revision as of 11:07, 18 March 2021

Gene SJ15067

  • transcription-direction:
    • positive
  • right-end-position:
    • 129025
  • left-end-position:
    • 121627
  • centisome-position:
    • 40.164253

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-3861
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5659
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7586
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7456
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6992
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-882
    • 6 reactions found over 5 reactions in the full pathway
  • PWY-3881
    • 2 reactions found over 3 reactions in the full pathway
  • MANNCAT-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15067&oldid=134918"