Difference between revisions of "SJ15069"
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(Created page with "Category:gene == Gene SJ19257 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-15117 ** Category:...") |
(Created page with "Category:gene == Gene SJ04004 == * transcription-direction: ** negative * right-end-position: ** 388870 * left-end-position: ** 359555 * centisome-position: ** 69.34322...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ04004 == |
| + | * transcription-direction: | ||
| + | ** negative | ||
| + | * right-end-position: | ||
| + | ** 388870 | ||
| + | * left-end-position: | ||
| + | ** 359555 | ||
| + | * centisome-position: | ||
| + | ** 69.34322 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[PEPCARBOX-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[PPC]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| − | ** '''6''' reactions found over '''16''' reactions in the full pathway | + | * [[PWY-241]] |
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-5913]] | ||
| + | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[PWY-6142]] | ||
| + | ** '''10''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[P23-PWY]] | ||
| + | ** '''9''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[PWYQT-4429]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6146]] | ||
| + | ** '''9''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[FERMENTATION-PWY]] | ||
| + | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
| + | * [[PWY-7124]] | ||
| + | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-6549]] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-1622]] | ||
| + | ** '''6''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[PWY-7117]] | ||
| + | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[PWY-7115]] | ||
| + | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
| + | </div> | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=388870}} | ||
| + | {{#set: left-end-position=359555}} | ||
| + | {{#set: centisome-position=69.34322 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=12}} |
Revision as of 15:17, 5 January 2021
Contents
Gene SJ04004
- transcription-direction:
- negative
- right-end-position:
- 388870
- left-end-position:
- 359555
- centisome-position:
- 69.34322
Organism(s) associated with this gene
Reaction(s) associated
- PEPCARBOX-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PPC
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-241
- 5 reactions found over 6 reactions in the full pathway
- PWY-5913
- 10 reactions found over 11 reactions in the full pathway
- PWY-6142
- 10 reactions found over 13 reactions in the full pathway
- P23-PWY
- 9 reactions found over 12 reactions in the full pathway
- PWYQT-4429
- 2 reactions found over 2 reactions in the full pathway
- PWY-6146
- 9 reactions found over 2 reactions in the full pathway
- FERMENTATION-PWY
- 11 reactions found over 16 reactions in the full pathway
- PWY-7124
- 8 reactions found over 8 reactions in the full pathway
- PWY-6549
- 8 reactions found over 9 reactions in the full pathway
- PWY-1622
- 6 reactions found over 13 reactions in the full pathway
- PWY-7117
- 10 reactions found over 12 reactions in the full pathway
- PWY-7115
- 9 reactions found over 10 reactions in the full pathway
