Difference between revisions of "SJ15126"

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(Created page with "Category:gene == Gene SJ12953 == * transcription-direction: ** positive * right-end-position: ** 25369 * left-end-position: ** 13172 * centisome-position: ** 3.7793882...")
(Created page with "Category:gene == Gene SJ15126 == * transcription-direction: ** negative * right-end-position: ** 140593 * left-end-position: ** 132646 * centisome-position: ** 44.06112...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12953 ==
+
== Gene SJ15126 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 25369
+
** 140593
 
* left-end-position:
 
* left-end-position:
−
** 13172
+
** 132646
 
* centisome-position:
 
* centisome-position:
−
** 3.7793882    
+
** 44.06112    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLUTAMIDOTRANS-RXN]]
+
* [[ADENPRIBOSYLTRAN-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GLUTAMIN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PRIBFAICARPISOM-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PRICI]]
+
* [[APPRT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[GUANPRIBOSYLTRAN-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-17900]]
+
* [[RXN-14270]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[HISTSYN-PWY]]
+
* [[PWY-7807]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[CITRULBIO-PWY]]
+
* [[PWY-6610]]
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[GLUTAMINDEG-PWY]]
+
* [[PWY-7805]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6605]]
−
{{#set: right-end-position=25369}}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=13172}}
+
* [[P121-PWY]]
−
{{#set: centisome-position=3.7793882   }}
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-6599]]
−
{{#set: nb reaction associated=5}}
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
{{#set: nb pathway associated=3}}
+
* [[PWY-6620]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=140593}}
 +
{{#set: left-end-position=132646}}
 +
{{#set: centisome-position=44.06112   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=7}}

Latest revision as of 11:00, 18 March 2021

Gene SJ15126

  • transcription-direction:
    • negative
  • right-end-position:
    • 140593
  • left-end-position:
    • 132646
  • centisome-position:
    • 44.06112

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7807
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6610
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6605
    • 1 reactions found over 2 reactions in the full pathway
  • P121-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6599
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6620
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15126&oldid=131762"