Difference between revisions of "SJ15262"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1113 CPD-1113] == * smiles: ** c(o)c2(c(c(o)c([n+])c(oc1(c(c(o)c(o)c(o)c1o)op(=o)([o-])occ(...")
 
(Created page with "Category:gene == Gene SJ15262 == * transcription-direction: ** positive * right-end-position: ** 75306 * left-end-position: ** 60939 * centisome-position: ** 20.379711...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1113 CPD-1113] ==
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== Gene SJ15262 ==
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* smiles:
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* transcription-direction:
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** c(o)c2(c(c(o)c([n+])c(oc1(c(c(o)c(o)c(o)c1o)op(=o)([o-])occ(oc(=o)[r2])coc([r1])=o))o2)o)
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** positive
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* common-name:
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* right-end-position:
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** 6-(α-d-glucosaminyl)-1-phosphatidyl-1d-myo-inositol
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** 75306
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== Reaction(s) known to consume the compound ==
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* left-end-position:
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== Reaction(s) known to produce the compound ==
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** 60939
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* [[3.1.1.69-RXN]]
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* centisome-position:
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== Reaction(s) of unknown directionality ==
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** 20.379711   
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{{#set: common-name=6-(α-d-glucosaminyl)-1-phosphatidyl-1d-myo-inositol}}
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[ACYLCOADEHYDROG-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PPCOAOm]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-11734]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13615]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14229]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14262]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14264]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-14278]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17775]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17779]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17783]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17784]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17788]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17792]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17796]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[FAO-PWY]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7094]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=75306}}
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{{#set: left-end-position=60939}}
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{{#set: centisome-position=20.379711    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=16}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:03, 18 March 2021

Gene SJ15262

  • transcription-direction:
    • positive
  • right-end-position:
    • 75306
  • left-end-position:
    • 60939
  • centisome-position:
    • 20.379711

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7094
    • 5 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15262&oldid=133043"