Difference between revisions of "SJ15310"

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(Created page with "Category:gene == Gene SJ12467 == * transcription-direction: ** negative * right-end-position: ** 172698 * left-end-position: ** 156857 * centisome-position: ** 20.928778...")
(Created page with "Category:gene == Gene SJ15310 == * transcription-direction: ** negative * right-end-position: ** 38904 * left-end-position: ** 31325 * centisome-position: ** 10.508008...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12467 ==
+
== Gene SJ15310 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 172698
+
** 38904
 
* left-end-position:
 
* left-end-position:
−
** 156857
+
** 31325
 
* centisome-position:
 
* centisome-position:
−
** 20.928778    
+
** 10.508008    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[NADH-DEHYDROG-A-RXN]]
−
* [[PHOSACETYLGLUCOSAMINEMUT-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PHOSPHOGLUCMUT-RXN]]
+
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16425]]
+
* [[NADH-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN0-5330]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-16426]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-16997]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16998]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-6906]]
+
* [[PWY0-1335]]
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[UDPNACETYLGALSYN-PWY]]
+
* [[PWY-4302]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5514]]
+
* [[PWY-3781]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6737]]
+
* [[PWY0-1334]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7238]]
+
* [[PWY-6692]]
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLYCOGENSYNTH-PWY]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GLUCOSE1PMETAB-PWY]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7900]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6731]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5941]]
 
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[GLYCOCAT-PWY]]
+
* [[PWY-5083]]
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-622]]
+
* [[PWY0-1573]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6317]]
+
* [[PWY-7269]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-2723]]
+
* [[PWY0-1568]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-3801]]
+
* [[PWY0-1567]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7343]]
+
* [[PWY-7279]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5940]]
 
−
** '''2''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-7902]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5384]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5661]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-422]]
 
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=172698}}
+
{{#set: right-end-position=38904}}
−
{{#set: left-end-position=156857}}
+
{{#set: left-end-position=31325}}
−
{{#set: centisome-position=20.928778   }}
+
{{#set: centisome-position=10.508008   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=21}}
+
{{#set: nb pathway associated=11}}

Latest revision as of 11:02, 18 March 2021

Gene SJ15310

  • transcription-direction:
    • negative
  • right-end-position:
    • 38904
  • left-end-position:
    • 31325
  • centisome-position:
    • 10.508008

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1335
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1334
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6692
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • PWY0-1573
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7269
    • 5 reactions found over 5 reactions in the full pathway
  • PWY0-1568
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1567
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7279
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15310&oldid=132725"