Difference between revisions of "SJ15347"

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(Created page with "Category:gene == Gene SJ07228 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
(Created page with "Category:gene == Gene SJ15347 == * transcription-direction: ** positive * right-end-position: ** 134124 * left-end-position: ** 113142 * centisome-position: ** 38.15816...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ07228 ==
+
== Gene SJ15347 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 134124
 +
* left-end-position:
 +
** 113142
 +
* centisome-position:
 +
** 38.15816   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-8025]]
+
* [[CHOLINE-KINASE-RXN]]
** Category: [[manual]]
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** Category: [[annotation]]
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-8026]]
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* [[ETHANOLAMINE-KINASE-RXN]]
** Category: [[manual]]
+
** Category: [[annotation]]
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN1F-152]]
 
** Category: [[manual]]
 
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7638]]
+
* [[PWY-7782]]
** '''2''' reactions found over '''4''' reactions in the full pathway
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** '''11''' reactions found over '''16''' reactions in the full pathway
* [[PWY-5944]]
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* [[PWY3O-450]]
** '''2''' reactions found over '''2''' reactions in the full pathway
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** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-5288]]
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* [[PWY-7818]]
** '''2''' reactions found over '''10''' reactions in the full pathway
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** '''2''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-7886]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3385]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY4FS-6]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=134124}}
 +
{{#set: left-end-position=113142}}
 +
{{#set: centisome-position=38.15816    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:07, 18 March 2021

Gene SJ15347

  • transcription-direction:
    • positive
  • right-end-position:
    • 134124
  • left-end-position:
    • 113142
  • centisome-position:
    • 38.15816

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway
  • PWY3O-450
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7818
    • 2 reactions found over 19 reactions in the full pathway
  • PWY-7886
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3385
    • 2 reactions found over 6 reactions in the full pathway
  • PWY4FS-6
    • 3 reactions found over 4 reactions in the full pathway