Difference between revisions of "SJ15367"

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(Created page with "Category:gene == Gene SJ16241 == * transcription-direction: ** positive * right-end-position: ** 394131 * left-end-position: ** 380681 * centisome-position: ** 55.19996...")
(Created page with "Category:gene == Gene SJ15367 == * transcription-direction: ** negative * right-end-position: ** 109700 * left-end-position: ** 77519 * centisome-position: ** 26.15651...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16241 ==
+
== Gene SJ15367 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 394131
+
** 109700
 
* left-end-position:
 
* left-end-position:
−
** 380681
+
** 77519
 
* centisome-position:
 
* centisome-position:
−
** 55.19996    
+
** 26.15651    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ADENYL-KIN-RXN]]
−
* [[1.1.1.145-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[DTDPGLUCDEHYDRAT-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[VALINE--TRNA-LIGASE-RXN]]
−
* [[RXN-10740]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12693]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12747]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12789]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-18332]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-5482]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-342]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-350]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-353]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[UDP-GLUCOSE-46-DEHYDRATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7219]]
−
* [[PWY-6808]]
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
* [[TRNA-CHARGING-PWY]]
−
* [[PWY-7657]]
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-7104]]
+
{{#set: right-end-position=109700}}
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
{{#set: left-end-position=77519}}
−
* [[PWY-6973]]
+
{{#set: centisome-position=26.15651   }}
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6974]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6976]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6953]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7414]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7315]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7318]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6942]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7440]]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7814]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-3221]]
 
−
** '''1''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[PWY-7413]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7312]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7316]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[DTDPRHAMSYN-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7688]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7301]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-3261]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6946]]
 
−
** '''6''' reactions found over '''22''' reactions in the full pathway
 
−
* [[PWY-6944]]
 
−
** '''2''' reactions found over '''25''' reactions in the full pathway
 
−
* [[PWY-6948]]
 
−
** '''2''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY66-378]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7299]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=394131}}
 
−
{{#set: left-end-position=380681}}
 
−
{{#set: centisome-position=55.19996   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=12}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=26}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:06, 18 March 2021

Gene SJ15367

  • transcription-direction:
    • negative
  • right-end-position:
    • 109700
  • left-end-position:
    • 77519
  • centisome-position:
    • 26.15651

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7219
    • 4 reactions found over 3 reactions in the full pathway
  • TRNA-CHARGING-PWY
    • 21 reactions found over 21 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15367&oldid=134500"