Difference between revisions of "SJ15379"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17312 CPD-17312] == * common-name: ** docosahexaenoyl-coa * smiles: ** ccc=ccc=ccc=ccc=ccc=...")
(Created page with "Category:gene == Gene SJ15379 == * transcription-direction: ** negative * right-end-position: ** 29947 * left-end-position: ** 11728 * centisome-position: ** 1.6641481...")
 
(7 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17312 CPD-17312] ==
+
== Gene SJ15379 ==
−
* common-name:
+
* transcription-direction:
−
** docosahexaenoyl-coa
+
** negative
−
* smiles:
+
* right-end-position:
−
** ccc=ccc=ccc=ccc=ccc=ccc=cccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
+
** 29947
−
* inchi-key:
+
* left-end-position:
−
** menfzxmqsyyvrk-crcgjgbysa-j
+
** 11728
−
* molecular-weight:
+
* centisome-position:
−
** 1073.981
+
** 1.6641481   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXN-16063]]
+
* [[S.japonica_carotenoid_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
* [[RXN-16063]]
+
* [[FORMYLTHFDEFORMYL-RXN]]
−
* [[RXN-16137]]
+
** Category: [[annotation]]
−
== Reaction(s) of unknown directionality ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: common-name=docosahexaenoyl-coa}}
+
== Pathway(s) associated ==
−
{{#set: inchi-key=inchikey=menfzxmqsyyvrk-crcgjgbysa-j}}
+
* [[PWY-7909]]
−
{{#set: molecular-weight=1073.981}}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[P164-PWY]]
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5497]]
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY-2201]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=29947}}
 +
{{#set: left-end-position=11728}}
 +
{{#set: centisome-position=1.6641481    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ15379

  • transcription-direction:
    • negative
  • right-end-position:
    • 29947
  • left-end-position:
    • 11728
  • centisome-position:
    • 1.6641481

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7909
    • 3 reactions found over 4 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15379&oldid=132059"