Difference between revisions of "SJ15379"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17312 CPD-17312] == * common-name: ** docosahexaenoyl-coa * smiles: ** ccc=ccc=ccc=ccc=ccc=...")
(Created page with "Category:gene == Gene SJ03311 == * transcription-direction: ** negative * right-end-position: ** 303625 * left-end-position: ** 285937 * centisome-position: ** 54.336166...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17312 CPD-17312] ==
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== Gene SJ03311 ==
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* common-name:
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* transcription-direction:
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** docosahexaenoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccc=ccc=ccc=ccc=ccc=ccc=cccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 303625
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* inchi-key:
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* left-end-position:
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** menfzxmqsyyvrk-crcgjgbysa-j
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** 285937
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* molecular-weight:
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* centisome-position:
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** 1073.981
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** 54.336166   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-16063]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-16063]]
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* [[1.1.3.37-RXN]]
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* [[RXN-16137]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=docosahexaenoyl-coa}}
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* [[L-GULONOLACTONE-OXIDASE-RXN]]
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{{#set: inchi-key=inchikey=menfzxmqsyyvrk-crcgjgbysa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=1073.981}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13689]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY3O-6]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY3DJ-35471]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6387]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7953]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6386]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY0-1261]]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=303625}}
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{{#set: left-end-position=285937}}
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{{#set: centisome-position=54.336166    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=6}}

Revision as of 20:20, 18 December 2020

Gene SJ03311

  • transcription-direction:
    • negative
  • right-end-position:
    • 303625
  • left-end-position:
    • 285937
  • centisome-position:
    • 54.336166

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY3O-6
    • 1 reactions found over 3 reactions in the full pathway
  • PWY3DJ-35471
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6387
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7953
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6386
    • 2 reactions found over 8 reactions in the full pathway
  • PWY0-1261
    • 3 reactions found over 12 reactions in the full pathway




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