Difference between revisions of "SJ15446"

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(Created page with "Category:metabolite == Metabolite CPD-17331 == * common-name: ** (9z,12z,15z,18z,21z)-tetracosapentaenoyl-coa * smiles: ** ccc=ccc=ccc=ccc=ccc=ccccccccc(sccnc(=o)ccnc(=o)c...")
(Created page with "Category:gene == Gene SJ15446 == * transcription-direction: ** positive * right-end-position: ** 80221 * left-end-position: ** 59008 * centisome-position: ** 19.963327...")
 
(One intermediate revision by one other user not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite CPD-17331 ==
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== Gene SJ15446 ==
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* common-name:
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* transcription-direction:
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** (9z,12z,15z,18z,21z)-tetracosapentaenoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** ccc=ccc=ccc=ccc=ccc=ccccccccc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
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** 80221
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* inchi-key:
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* left-end-position:
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** bnamtmvbovnnsh-afqbpcmksa-j
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** 59008
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* molecular-weight:
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* centisome-position:
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** 1104.05
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** 19.963327   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-16132]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[NITRATE-REDUCTASE-NADH-RXN]]
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{{#set: common-name=(9z,12z,15z,18z,21z)-tetracosapentaenoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=bnamtmvbovnnsh-afqbpcmksa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1104.05}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[NITRATE-REDUCTASE-NADPH-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[NITRATE-REDUCTASE-NADPORNOPH-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[NITRATREDUCT-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-381]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5675]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=80221}}
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{{#set: left-end-position=59008}}
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{{#set: centisome-position=19.963327    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:11, 18 March 2021

Gene SJ15446

  • transcription-direction:
    • positive
  • right-end-position:
    • 80221
  • left-end-position:
    • 59008
  • centisome-position:
    • 19.963327

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-381
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5675
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15446&oldid=136627"