Difference between revisions of "SJ15446"

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(Created page with "Category:gene == Gene SJ14028 == * transcription-direction: ** positive * right-end-position: ** 79386 * left-end-position: ** 52710 * centisome-position: ** 16.085962...")
 
(Created page with "Category:gene == Gene SJ16633 == * transcription-direction: ** negative * right-end-position: ** 84831 * left-end-position: ** 59635 * centisome-position: ** 21.39902...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14028 ==
+
== Gene SJ16633 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 79386
+
** 84831
 
* left-end-position:
 
* left-end-position:
−
** 52710
+
** 59635
 
* centisome-position:
 
* centisome-position:
−
** 16.085962    
+
** 21.39902    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[LIPOXYGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-1321]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13395]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-8497]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8647]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY66-375]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-5410]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-5409]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-735]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY66-392]]
−
{{#set: right-end-position=79386}}
+
** '''1''' reactions found over '''11''' reactions in the full pathway
−
{{#set: left-end-position=52710}}
+
* [[PWY-6917]]
−
{{#set: centisome-position=16.085962   }}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5406]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5407]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5408]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=84831}}
 +
{{#set: left-end-position=59635}}
 +
{{#set: centisome-position=21.39902   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=9}}

Revision as of 14:23, 26 August 2019

Gene SJ16633

  • transcription-direction:
    • negative
  • right-end-position:
    • 84831
  • left-end-position:
    • 59635
  • centisome-position:
    • 21.39902

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-375
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5410
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-5409
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY66-392
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-6917
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5406
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5407
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5408
    • 1 reactions found over 4 reactions in the full pathway




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