Difference between revisions of "SJ15468"

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(Created page with "Category:gene == Gene SJ20889 == * transcription-direction: ** positive * right-end-position: ** 382129 * left-end-position: ** 374217 * centisome-position: ** 61.297005...")
(Created page with "Category:gene == Gene SJ15468 == * transcription-direction: ** positive * right-end-position: ** 55097 * left-end-position: ** 52617 * centisome-position: ** 17.805489...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20889 ==
+
== Gene SJ15468 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 382129
+
** 55097
 
* left-end-position:
 
* left-end-position:
−
** 374217
+
** 52617
 
* centisome-position:
 
* centisome-position:
−
** 61.297005    
+
** 17.805489    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[3.1.1.64-RXN]]
+
* [[4.3.1.17-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[3.1.1.73-RXN]]
+
* [[5.1.1.18-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
* [[AMINO-ACID-RACEMASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
* [[DSERDEAM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10711]]
+
* [[RXN-15125]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10767]]
+
* [[RXN-15581]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12086]]
+
* [[RXN0-2381]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12252]]
+
* [[RXN0-2382]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12579]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXNQT-4366]]
+
* [[TRYPSYN-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6784]]
+
* [[PWY-6196]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''n.a''' reactions in the full pathway
−
* [[PWY-6303]]
+
* [[PWY-6455]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[SERDEG-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3661]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[LIPAS-PWY]]
+
* [[PWY-5497]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY0-1535]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6949]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[TRPSYN-PWY]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=382129}}
+
{{#set: right-end-position=55097}}
−
{{#set: left-end-position=374217}}
+
{{#set: left-end-position=52617}}
−
{{#set: centisome-position=61.297005   }}
+
{{#set: centisome-position=17.805489   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=12}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=8}}

Latest revision as of 11:07, 18 March 2021

Gene SJ15468

  • transcription-direction:
    • positive
  • right-end-position:
    • 55097
  • left-end-position:
    • 52617
  • centisome-position:
    • 17.805489

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6196
    • 2 reactions found over n.a reactions in the full pathway
  • PWY-6455
    • 1 reactions found over 3 reactions in the full pathway
  • SERDEG-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3661
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • PWY0-1535
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6949
    • 1 reactions found over 6 reactions in the full pathway
  • TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15468&oldid=134925"