Difference between revisions of "SJ15522"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19153 CPD-19153] == * common-name: ** 3-oxo-(5z)-dodecenoyl-coa * smiles: ** ccccccc=ccc(=o...")
 
(Created page with "Category:gene == Gene SJ15522 == * transcription-direction: ** negative * right-end-position: ** 43916 * left-end-position: ** 30589 * centisome-position: ** 10.382385...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19153 CPD-19153] ==
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== Gene SJ15522 ==
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* common-name:
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* transcription-direction:
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** 3-oxo-(5z)-dodecenoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccccccc=ccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 43916
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* inchi-key:
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* left-end-position:
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** vklhslowdwgvgp-cggpsvllsa-j
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** 30589
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* molecular-weight:
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* centisome-position:
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** 957.775
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** 10.382385   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-17799]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-17798]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[3.1.1.64-RXN]]
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{{#set: common-name=3-oxo-(5z)-dodecenoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=vklhslowdwgvgp-cggpsvllsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=957.775}}
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* [[CARBOXYLESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10711]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10767]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12252]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12575]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15133]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15135]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXNQT-4366]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[STEROL-ESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6303]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6857]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7424]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=43916}}
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{{#set: left-end-position=30589}}
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{{#set: centisome-position=10.382385    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=11}}
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{{#set: nb pathway associated=3}}

Latest revision as of 11:01, 18 March 2021

Gene SJ15522

  • transcription-direction:
    • negative
  • right-end-position:
    • 43916
  • left-end-position:
    • 30589
  • centisome-position:
    • 10.382385

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7424
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15522&oldid=132021"