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| Line 1: |
Line 1: |
| | [[Category:gene]] | | [[Category:gene]] |
| − | == Gene SJ02885 == | + | == Gene SJ20278 == |
| | * transcription-direction: | | * transcription-direction: |
| − | ** positive | + | ** negative |
| | * right-end-position: | | * right-end-position: |
| − | ** 22694 | + | ** 131896 |
| | * left-end-position: | | * left-end-position: |
| − | ** 12347 | + | ** 32105 |
| | * centisome-position: | | * centisome-position: |
| − | ** 9.684453 | + | ** 15.305588 |
| | == Organism(s) associated with this gene == | | == Organism(s) associated with this gene == |
| | * [[S.japonica_carotenoid_curated]] | | * [[S.japonica_carotenoid_curated]] |
| | == Reaction(s) associated == | | == Reaction(s) associated == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[PEPTIDYLPROLYL-ISOMERASE-RXN]] |
| − | * [[2.5.1.32-RXN]] | |
| | ** Category: [[annotation]] | | ** Category: [[annotation]] |
| | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| | ** Category: [[orthology]] | | ** Category: [[orthology]] |
| | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | * [[FARNESYLTRANSTRANSFERASE-RXN]]
| + | {{#set: transcription-direction=negative}} |
| − | ** Category: [[annotation]]
| + | {{#set: right-end-position=131896}} |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| + | {{#set: left-end-position=32105}} |
| − | * [[FPPSYN-RXN]]
| + | {{#set: centisome-position=15.305588 }} |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[GPPSYN-RXN]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-12263]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-13162]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-13323]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXN66-281]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXNARA-8002]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) associated ==
| |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * [[PWY-7943]]
| |
| − | ** '''1''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[PWY-6475]]
| |
| − | ** '''8''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[PWY-6287]]
| |
| − | ** '''2''' reactions found over '''5''' reactions in the full pathway
| |
| − | * [[PWY-7492]]
| |
| − | ** '''1''' reactions found over '''6''' reactions in the full pathway
| |
| − | * [[PWY-6659]]
| |
| − | ** '''1''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[PWY-7517]]
| |
| − | ** '''1''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[PWY-6691]]
| |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-7721]]
| |
| − | ** '''2''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[PWY-7736]]
| |
| − | ** '''3''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[PWY-5120]]
| |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| |
| − | * [[PWY-7720]]
| |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-6859]]
| |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[PWY-7102]]
| |
| − | ** '''3''' reactions found over '''6''' reactions in the full pathway
| |
| − | * [[PWY-5123]]
| |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-6383]]
| |
| − | ** '''2''' reactions found over '''5''' reactions in the full pathway
| |
| − | * [[PWY-7410]]
| |
| − | ** '''1''' reactions found over '''4''' reactions in the full pathway
| |
| − | * [[PWY-5122]]
| |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| |
| − | * [[PWY-7141]]
| |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PWY-7659]]
| |
| − | ** '''1''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-7709]]
| |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PWY-7182]]
| |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PWY-5875]]
| |
| − | ** '''1''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-6767]]
| |
| − | ** '''1''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-7072]]
| |
| − | ** '''1''' reactions found over '''14''' reactions in the full pathway
| |
| − | * [[PWY-6105]]
| |
| − | ** '''2''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-5670]]
| |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-5942]]
| |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| |
| − | </div>
| |
| − | {{#set: transcription-direction=positive}} | |
| − | {{#set: right-end-position=22694}} | |
| − | {{#set: left-end-position=12347}} | |
| − | {{#set: centisome-position=9.684453 }} | |
| | {{#set: organism associated=S.japonica_carotenoid_curated}} | | {{#set: organism associated=S.japonica_carotenoid_curated}} |
| − | {{#set: nb reaction associated=9}} | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated=27}}
| |
