Difference between revisions of "SJ15543"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ09991 == * transcription-direction: ** positive * right-end-position: ** 199601 * left-end-position: ** 180260 * centisome-position: ** 45.097244...")
(Created page with "Category:gene == Gene SJ19405 == * transcription-direction: ** positive * right-end-position: ** 570454 * left-end-position: ** 557698 * centisome-position: ** 87.968735...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ09991 ==
+
== Gene SJ19405 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 199601
+
** 570454
 
* left-end-position:
 
* left-end-position:
** 180260
+
** 557698
 
* centisome-position:
 
* centisome-position:
** 45.097244    
+
** 87.968735    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN0-2381]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[RXN3DJ-25]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN0-2382]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[TRYPSYN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[TRPSYN-PWY]]
+
* [[PWY3DJ-11470]]
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''10''' reactions in the full pathway
* [[PWY-6949]]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=199601}}
+
{{#set: right-end-position=570454}}
{{#set: left-end-position=180260}}
+
{{#set: left-end-position=557698}}
{{#set: centisome-position=45.097244   }}
+
{{#set: centisome-position=87.968735   }}
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}

Revision as of 20:28, 18 December 2020

Gene SJ19405

  • transcription-direction:
    • positive
  • right-end-position:
    • 570454
  • left-end-position:
    • 557698
  • centisome-position:
    • 87.968735

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY3DJ-11470
    • 3 reactions found over 10 reactions in the full pathway