Difference between revisions of "SJ15546"
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(Created page with "Category:gene == Gene SJ01608 == * transcription-direction: ** positive * right-end-position: ** 56877 * left-end-position: ** 25872 * centisome-position: ** 17.495623...") |
(Created page with "Category:gene == Gene SJ07458 == * transcription-direction: ** negative * right-end-position: ** 310047 * left-end-position: ** 296793 * centisome-position: ** 65.17638...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ07458 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 310047 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 296793 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 65.17638 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[AMCL]] | |
| − | * [[ | + | ** Category: [[orthology]] |
| − | ** Category: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[SAMDECARB-RXN]] |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
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| − | |||
| − | |||
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== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY | + | * [[BSUBPOLYAMSYN-PWY]] |
| − | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6834]] |
| − | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | * [[ | + | * [[ARGSPECAT-PWY]] |
| − | + | ** '''2''' reactions found over '''2''' reactions in the full pathway | |
| − | + | {{#set: transcription-direction=negative}} | |
| − | ** ''' | + | {{#set: right-end-position=310047}} |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=296793}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=65.17638 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 15:21, 5 January 2021
Contents
Gene SJ07458
- transcription-direction:
- negative
- right-end-position:
- 310047
- left-end-position:
- 296793
- centisome-position:
- 65.17638
Organism(s) associated with this gene
Reaction(s) associated
- AMCL
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- SAMDECARB-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- BSUBPOLYAMSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-6834
- 2 reactions found over 4 reactions in the full pathway
- ARGSPECAT-PWY
- 2 reactions found over 2 reactions in the full pathway
