Difference between revisions of "SJ15628"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] == * common-name: ** (3z)-phytochromobilin * smiles: *...")
(Created page with "Category:gene == Gene SJ15628 == * transcription-direction: ** negative * right-end-position: ** 6250 * left-end-position: ** 5816 * centisome-position: ** 84.645615 =...")
 
(7 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] ==
+
== Gene SJ15628 ==
−
* common-name:
+
* transcription-direction:
−
** (3z)-phytochromobilin
+
** negative
−
* smiles:
+
* right-end-position:
−
** cc=c1(c(c)c(nc1=cc4(=c(c)c(ccc([o-])=o)=c(c=c2(c(ccc([o-])=o)=c(c)c(=n2)c=c3(c(c)=c(c=c)c(=o)n3)))n4))=o)
+
** 6250
−
* inchi-key:
+
* left-end-position:
−
** dkmlmzvdtgoegu-aikfxvfzsa-l
+
** 5816
−
* molecular-weight:
+
* centisome-position:
−
** 582.655
+
** 84.645615   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
== Reaction(s) known to produce the compound ==
+
* [[S.japonica_carotenoid_curated]]
−
* [[1.3.7.4-RXN]]
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
* [[FERRIC-CHELATE-REDUCTASE-RXN]]
−
{{#set: common-name=(3z)-phytochromobilin}}
+
** Category: [[annotation]]
−
{{#set: inchi-key=inchikey=dkmlmzvdtgoegu-aikfxvfzsa-l}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: molecular-weight=582.655}}
+
== Pathway(s) associated ==
 +
* [[PWY-6854]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5934]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=6250}}
 +
{{#set: left-end-position=5816}}
 +
{{#set: centisome-position=84.645615    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=2}}

Latest revision as of 11:03, 18 March 2021

Gene SJ15628

  • transcription-direction:
    • negative
  • right-end-position:
    • 6250
  • left-end-position:
    • 5816
  • centisome-position:
    • 84.645615

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6854
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5934
    • 1 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15628&oldid=133038"