Difference between revisions of "SJ15634"

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(Created page with "Category:gene == Gene SJ06726 == * transcription-direction: ** positive * right-end-position: ** 121372 * left-end-position: ** 57078 * centisome-position: ** 12.09295...")
(Created page with "Category:gene == Gene SJ15634 == * transcription-direction: ** positive * right-end-position: ** 267464 * left-end-position: ** 262381 * centisome-position: ** 89.508286...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06726 ==
+
== Gene SJ15634 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 121372
+
** 267464
 
* left-end-position:
 
* left-end-position:
−
** 57078
+
** 262381
 
* centisome-position:
 
* centisome-position:
−
** 12.09295    
+
** 89.508286    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PEROXID-RXN]]
−
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-14240]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ACOACXr]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BIOTIN-CARBOXYL-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DALADALALIG-RXN]]
+
* [[RXN-15288]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5055]]
+
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7214]]
−
* [[PWY-7388]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-7445]]
−
* [[PWY-6679]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-5466]]
−
* [[PWY0-1264]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-6824]]
−
* [[PWY-5744]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-5469]]
−
* [[PWY-5743]]
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5789]]
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-7953]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6386]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6387]]
 
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6722]]
+
* [[PWY-5461]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-4381]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=121372}}
+
{{#set: right-end-position=267464}}
−
{{#set: left-end-position=57078}}
+
{{#set: left-end-position=262381}}
−
{{#set: centisome-position=12.09295   }}
+
{{#set: centisome-position=89.508286   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:00, 18 March 2021

Gene SJ15634

  • transcription-direction:
    • positive
  • right-end-position:
    • 267464
  • left-end-position:
    • 262381
  • centisome-position:
    • 89.508286

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15634&oldid=131717"